STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cnot3CCR4-NOT transcription complex subunit 3 isoform X2. (751 aa)    
Predicted Functional Partners:
Cnot9
Cell differentiation protein RCD1 homolog isoform X1.
    
 0.998
Cnot2
CCR4-NOT transcription complex subunit 2 isoform X2.
    
0.998
Cnot4
CCR4-NOT transcription complex subunit 4 isoform X2.
   
 0.993
Cnot1
CCR4-NOT transcription complex subunit 1.
    
 0.990
Cnot8
CCR4-NOT transcription complex subunit 8 isoform X1.
    
 0.989
Cnot7
CCR4-NOT transcription complex subunit 7 isoform X2.
    
 0.989
ENSDORP00000022139
annotation not available
    
 0.986
Cnot6
CCR4-NOT transcription complex subunit 6 isoform X1.
    
 0.978
Cnot6l
CCR4-NOT transcription complex subunit 6-like.
    
 0.977
Cnot11
CCR4-NOT transcription complex subunit 11.
    
 0.974
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.