STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gtf2ird1General transcription factor II-I repeat domain-containing protein 1. (984 aa)    
Predicted Functional Partners:
Gtf2i
General transcription factor II-I isoform X1.
     
0.854
Prkg1
cGMP-dependent protein kinase.
     
 0.851
Nsun5
Probable 28S rRNA (Cytosine-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.537
Rfc2
Replication factor C subunit 2.
      
 0.537
Baz1b
Tyrosine-protein kinase BAZ1B.
      
 0.537
Prdm16
PR domain zinc finger protein 16.
    
 
 0.493
Clip2
CAP-Gly domain-containing linker protein 2.
      
 0.468
Tbl2
Transducin beta-like protein 2.
      
 0.457
Pias2
E3 SUMO-protein ligase PIAS2 isoform X1.
    
 
 0.446
Pde6c
Phosphodiesterase.
      
 0.436
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.