STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nufip2Nuclear fragile X mental retardation-interacting protein 2. (678 aa)    
Predicted Functional Partners:
G3bp1
Ras GTPase-activating protein-binding protein 1.
    
 
 0.907
G3bp2
Ras GTPase-activating protein-binding protein 2 isoform X1.
    
 
 0.902
Atxn2l
Ataxin-2-like protein isoform X11.
    
 
 0.873
Trip12
E3 ubiquitin-protein ligase TRIP12 isoform X7.
   
    0.864
Ddx6
Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.
   
 
 0.815
Fam98a
Protein FAM98A.
    
 
 0.795
Fmr1
Fragile X mental retardation protein 1 isoform X1.
    
 
 0.785
Lsm12
Protein LSM12 homolog.
    
 
 0.738
Atxn2
Ataxin-2.
    
 
 0.716
Caprin1
Caprin-1.
    
 
 0.661
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.