STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tnfrsf21Tumor necrosis factor receptor superfamily member 21. (656 aa)    
Predicted Functional Partners:
App
Amyloid beta A4 protein isoform X1.
    
 
 0.958
Aplp1
Amyloid-like protein 1.
    
 
 0.792
Aplp2
Amyloid-like protein 2 isoform X3.
    
 
 0.696
Podxl2
Podocalyxin-like protein 2.
    
 
 0.696
Tradd
Tumor necrosis factor receptor type 1-associated DEATH domain protein.
    
 
 0.694
Hhip
Hedgehog-interacting protein.
    
 
 0.617
Wfdc13
WAP four-disulfide core domain 13.
    
 
 0.617
Casp6
Caspase-6 isoform X2; Belongs to the peptidase C14A family.
      
 0.537
Pla2g4a
Phospholipase A2.
      
 0.456
Ngfr
Tumor necrosis factor receptor superfamily member 16.
    
 
 0.419
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.