Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEV92727.1 | SEV97339.1 | SAMN05421595_0453 | SAMN05421595_0656 | Citrate synthase. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.958 |
| SEV92727.1 | SEW08628.1 | SAMN05421595_0453 | SAMN05421595_1187 | Citrate synthase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.887 |
| SEV92727.1 | SEW11898.1 | SAMN05421595_0453 | SAMN05421595_1352 | Citrate synthase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.889 |
| SEV92727.1 | fumC | SAMN05421595_0453 | SAMN05421595_0006 | Citrate synthase. | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.920 |
| SEV92727.1 | gltA | SAMN05421595_0453 | SAMN05421595_2630 | Citrate synthase. | Citrate synthase; Belongs to the citrate synthase family. | 0.883 |
| SEV92727.1 | mdh | SAMN05421595_0453 | SAMN05421595_1941 | Citrate synthase. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.973 |
| SEV92727.1 | nadB | SAMN05421595_0453 | SAMN05421595_1411 | Citrate synthase. | L-aspartate oxidase. | 0.791 |
| SEV92727.1 | sdhA | SAMN05421595_0453 | SAMN05421595_0504 | Citrate synthase. | Succinate dehydrogenase subunit A. | 0.965 |
| SEV92727.1 | sdhB | SAMN05421595_0453 | SAMN05421595_0505 | Citrate synthase. | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.921 |
| SEV92727.1 | sucA | SAMN05421595_0453 | SAMN05421595_1877 | Citrate synthase. | 2-oxoglutarate dehydrogenase E1 component. | 0.984 |
| SEV97339.1 | SEV92727.1 | SAMN05421595_0656 | SAMN05421595_0453 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Citrate synthase. | 0.958 |
| SEV97339.1 | SEW08628.1 | SAMN05421595_0656 | SAMN05421595_1187 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.865 |
| SEV97339.1 | SEW11898.1 | SAMN05421595_0656 | SAMN05421595_1352 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.865 |
| SEV97339.1 | fumC | SAMN05421595_0656 | SAMN05421595_0006 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.953 |
| SEV97339.1 | gltA | SAMN05421595_0656 | SAMN05421595_2630 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Citrate synthase; Belongs to the citrate synthase family. | 0.961 |
| SEV97339.1 | mdh | SAMN05421595_0656 | SAMN05421595_1941 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.992 |
| SEV97339.1 | nadB | SAMN05421595_0656 | SAMN05421595_1411 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | L-aspartate oxidase. | 0.874 |
| SEV97339.1 | sdhA | SAMN05421595_0656 | SAMN05421595_0504 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Succinate dehydrogenase subunit A. | 0.998 |
| SEV97339.1 | sdhB | SAMN05421595_0656 | SAMN05421595_0505 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.993 |
| SEV97339.1 | sucA | SAMN05421595_0656 | SAMN05421595_1877 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 2-oxoglutarate dehydrogenase E1 component. | 0.915 |
page 1 of 6