STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV84917.1Subtilase family protein. (499 aa)    
Predicted Functional Partners:
SEW43486.1
Type VII secretion protein EccB.
   
 0.861
SEW08259.1
Serine protease.
  
 
0.825
SEW40408.1
RHS repeat-associated core domain-containing protein.
  
  0.564
SEV91430.1
Hypothetical protein.
   
  0.561
SEW44295.1
Subtilase family protein; Partial gene; manually curated.
 
0.527
SEW09033.1
Trypsin.
 
 
  0.493
SEW43706.1
Trypsin.
 
 
  0.487
SEV84887.1
Signal transduction histidine kinase.
 
     0.483
SEW02181.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.481
SEW43443.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.481
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.