STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV93518.1Cell volume regulation protein A. (532 aa)    
Predicted Functional Partners:
SEV93494.1
Putative regulatory protein, FmdB family.
      0.832
SEV93540.1
5-formyltetrahydrofolate cyclo-ligase.
       0.678
trkA-2
Trk system potassium uptake protein TrkA.
   
 0.579
SEW13616.1
ATP-dependent DNA helicase RecG.
  
     0.507
moeA
Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
       0.496
moaC
Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
       0.496
moaB
Molybdopterin adenylyltransferase.
       0.496
SEV93620.1
Ribosomal-protein-alanine N-acetyltransferase.
       0.496
trkA
Trk system potassium uptake protein TrkA.
 
   
 0.495
SEW31209.1
Hypothetical protein.
    
 
 0.490
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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