STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV95936.1Biotin transport system ATP-binding protein. (232 aa)    
Predicted Functional Partners:
SEV95911.1
Biotin transport system substrate-specific component.
 
 
 0.999
SEV95963.1
Biotin transport system permease protein.
 
 0.999
SEW39622.1
Energy-coupling factor transporter transmembrane protein EcfT.
 
 0.988
SEW33823.1
Cobalt/nickel transport system permease protein.
 
 0.945
cbiM
Cobalt/nickel transport system permease protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
 0.940
SEV87520.1
Energy-coupling factor transport system permease protein.
  
 0.935
SEW33848.1
Sirohydrochlorin cobaltochelatase.
   
 0.810
SEW33856.1
precorrin-3B C17-methyltransferase.
  
 
 0.799
SEW35133.1
Peptide/nickel transport system ATP-binding protein.
 
 
0.793
cobIJ
Precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase; Belongs to the precorrin methyltransferase family.
  
 
 0.726
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.