rpmG protein (Austwickia chelonae) - STRING interaction network

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second shell of interactors

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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Score

rpmG

LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family. (56 aa)

Predicted Functional Partners:

rplR

0.998

rpsF

0.997

rpmB

0.994

rpsZ

0.993

SEV97049.1

0.993

rpmI

0.993

rpmE

0.992

rpsR

0.992

rplM

0.991

rplU

0.991

Your Current Organism:

Austwickia chelonae

NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SEV97049.1	rplM	SAMN05421595_0644	SAMN05421595_0652	LSU ribosomal protein L36P; Manually curated.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.995
SEV97049.1	rplR	SAMN05421595_0644	SAMN05421595_0636	LSU ribosomal protein L36P; Manually curated.	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
SEV97049.1	rplU	SAMN05421595_0644	SAMN05421595_1630	LSU ribosomal protein L36P; Manually curated.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.994
SEV97049.1	rpmB	SAMN05421595_0644	SAMN05421595_1724	LSU ribosomal protein L36P; Manually curated.	Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.993
SEV97049.1	rpmE	SAMN05421595_0644	SAMN05421595_1860	LSU ribosomal protein L36P; Manually curated.	LSU ribosomal protein L31P; Binds the 23S rRNA.	0.992
SEV97049.1	rpmG	SAMN05421595_0644	SAMN05421595_0601	LSU ribosomal protein L36P; Manually curated.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.993
SEV97049.1	rpmI	SAMN05421595_0644	SAMN05421595_1581	LSU ribosomal protein L36P; Manually curated.	Large subunit ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.994
SEV97049.1	rpsF	SAMN05421595_0644	SAMN05421595_2903	LSU ribosomal protein L36P; Manually curated.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.998
SEV97049.1	rpsR	SAMN05421595_0644	SAMN05421595_2901	LSU ribosomal protein L36P; Manually curated.	SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.991
SEV97049.1	rpsZ	SAMN05421595_0644	SAMN05421595_0633	LSU ribosomal protein L36P; Manually curated.	SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.997
rplM	SEV97049.1	SAMN05421595_0652	SAMN05421595_0644	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L36P; Manually curated.	0.995
rplM	rplR	SAMN05421595_0652	SAMN05421595_0636	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
rplM	rplU	SAMN05421595_0652	SAMN05421595_1630	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.998
rplM	rpmB	SAMN05421595_0652	SAMN05421595_1724	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.991
rplM	rpmE	SAMN05421595_0652	SAMN05421595_1860	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L31P; Binds the 23S rRNA.	0.990
rplM	rpmG	SAMN05421595_0652	SAMN05421595_0601	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.991
rplM	rpmI	SAMN05421595_0652	SAMN05421595_1581	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Large subunit ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.995
rplM	rpsF	SAMN05421595_0652	SAMN05421595_2903	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.998
rplM	rpsR	SAMN05421595_0652	SAMN05421595_2901	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.994
rplM	rpsZ	SAMN05421595_0652	SAMN05421595_0633	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.991