Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEV88544.1 | SEV88672.1 | SAMN05421595_0240 | SAMN05421595_0247 | ABC transporter. | Putative ABC transport system ATP-binding protein. | 0.752 |
SEV88544.1 | SEV98530.1 | SAMN05421595_0240 | SAMN05421595_0713 | ABC transporter. | FtsX-like permease family protein. | 0.605 |
SEV88544.1 | SEV99892.1 | SAMN05421595_0240 | SAMN05421595_0777 | ABC transporter. | Putative ABC transport system ATP-binding protein. | 0.704 |
SEV88544.1 | SEW34649.1 | SAMN05421595_0240 | SAMN05421595_2332 | ABC transporter. | Putative ABC transport system ATP-binding protein. | 0.706 |
SEV88544.1 | SEW37005.1 | SAMN05421595_0240 | SAMN05421595_2486 | ABC transporter. | Putative ABC transport system ATP-binding protein. | 0.755 |
SEV88672.1 | SEV88544.1 | SAMN05421595_0247 | SAMN05421595_0240 | Putative ABC transport system ATP-binding protein. | ABC transporter. | 0.752 |
SEV88672.1 | SEV98530.1 | SAMN05421595_0247 | SAMN05421595_0713 | Putative ABC transport system ATP-binding protein. | FtsX-like permease family protein. | 0.605 |
SEV92265.1 | SEV98530.1 | SAMN05421595_0431 | SAMN05421595_0713 | Putative ABC transport system ATP-binding protein. | FtsX-like permease family protein. | 0.674 |
SEV98509.1 | SEV98530.1 | SAMN05421595_0712 | SAMN05421595_0713 | Putative ABC transport system ATP-binding protein. | FtsX-like permease family protein. | 0.774 |
SEV98509.1 | SEV98549.1 | SAMN05421595_0712 | SAMN05421595_0714 | Putative ABC transport system ATP-binding protein. | ABC-type transport system, involved in lipoprotein release, permease component. | 0.771 |
SEV98509.1 | SEV98568.1 | SAMN05421595_0712 | SAMN05421595_0715 | Putative ABC transport system ATP-binding protein. | Hypothetical protein. | 0.636 |
SEV98530.1 | SEV88544.1 | SAMN05421595_0713 | SAMN05421595_0240 | FtsX-like permease family protein. | ABC transporter. | 0.605 |
SEV98530.1 | SEV88672.1 | SAMN05421595_0713 | SAMN05421595_0247 | FtsX-like permease family protein. | Putative ABC transport system ATP-binding protein. | 0.605 |
SEV98530.1 | SEV92265.1 | SAMN05421595_0713 | SAMN05421595_0431 | FtsX-like permease family protein. | Putative ABC transport system ATP-binding protein. | 0.674 |
SEV98530.1 | SEV98509.1 | SAMN05421595_0713 | SAMN05421595_0712 | FtsX-like permease family protein. | Putative ABC transport system ATP-binding protein. | 0.774 |
SEV98530.1 | SEV98549.1 | SAMN05421595_0713 | SAMN05421595_0714 | FtsX-like permease family protein. | ABC-type transport system, involved in lipoprotein release, permease component. | 0.776 |
SEV98530.1 | SEV98568.1 | SAMN05421595_0713 | SAMN05421595_0715 | FtsX-like permease family protein. | Hypothetical protein. | 0.636 |
SEV98530.1 | SEV99892.1 | SAMN05421595_0713 | SAMN05421595_0777 | FtsX-like permease family protein. | Putative ABC transport system ATP-binding protein. | 0.657 |
SEV98530.1 | SEW03301.1 | SAMN05421595_0713 | SAMN05421595_0940 | FtsX-like permease family protein. | Putative ABC transport system ATP-binding protein; Manually curated. | 0.605 |
SEV98530.1 | SEW34649.1 | SAMN05421595_0713 | SAMN05421595_2332 | FtsX-like permease family protein. | Putative ABC transport system ATP-binding protein. | 0.656 |
page 1 of 2