Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEV90350.1 | SEV93397.1 | SAMN05421595_0338 | SAMN05421595_0485 | Hypothetical protein. | Hypothetical protein. | 0.498 |
SEV90350.1 | SEV99462.1 | SAMN05421595_0338 | SAMN05421595_0758 | Hypothetical protein. | Hypothetical protein. | 0.712 |
SEV90350.1 | SEW00470.1 | SAMN05421595_0338 | SAMN05421595_0803 | Hypothetical protein. | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | 0.570 |
SEV90350.1 | SEW02373.1 | SAMN05421595_0338 | SAMN05421595_0895 | Hypothetical protein. | Hypothetical protein. | 0.588 |
SEV90350.1 | SEW27651.1 | SAMN05421595_0338 | SAMN05421595_1727 | Hypothetical protein. | Protein of unknown function; Manually curated. | 0.694 |
SEV90350.1 | SEW41905.1 | SAMN05421595_0338 | SAMN05421595_2912 | Hypothetical protein. | Hypothetical protein. | 0.617 |
SEV93397.1 | SEV90350.1 | SAMN05421595_0485 | SAMN05421595_0338 | Hypothetical protein. | Hypothetical protein. | 0.498 |
SEV93397.1 | SEV99462.1 | SAMN05421595_0485 | SAMN05421595_0758 | Hypothetical protein. | Hypothetical protein. | 0.680 |
SEV93397.1 | SEW00470.1 | SAMN05421595_0485 | SAMN05421595_0803 | Hypothetical protein. | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | 0.764 |
SEV93397.1 | SEW02373.1 | SAMN05421595_0485 | SAMN05421595_0895 | Hypothetical protein. | Hypothetical protein. | 0.435 |
SEV93397.1 | SEW27651.1 | SAMN05421595_0485 | SAMN05421595_1727 | Hypothetical protein. | Protein of unknown function; Manually curated. | 0.510 |
SEV93397.1 | SEW32660.1 | SAMN05421595_0485 | SAMN05421595_2087 | Hypothetical protein. | Protein of unknown function. | 0.680 |
SEV93397.1 | SEW41905.1 | SAMN05421595_0485 | SAMN05421595_2912 | Hypothetical protein. | Hypothetical protein. | 0.457 |
SEV99415.1 | SEV99443.1 | SAMN05421595_0756 | SAMN05421595_0757 | Hypothetical protein; Belongs to the LOG family. | Hypothetical protein. | 0.538 |
SEV99415.1 | SEV99462.1 | SAMN05421595_0756 | SAMN05421595_0758 | Hypothetical protein; Belongs to the LOG family. | Hypothetical protein. | 0.685 |
SEV99443.1 | SEV99415.1 | SAMN05421595_0757 | SAMN05421595_0756 | Hypothetical protein. | Hypothetical protein; Belongs to the LOG family. | 0.538 |
SEV99443.1 | SEV99462.1 | SAMN05421595_0757 | SAMN05421595_0758 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SEV99462.1 | SEV90350.1 | SAMN05421595_0758 | SAMN05421595_0338 | Hypothetical protein. | Hypothetical protein. | 0.712 |
SEV99462.1 | SEV93397.1 | SAMN05421595_0758 | SAMN05421595_0485 | Hypothetical protein. | Hypothetical protein. | 0.680 |
SEV99462.1 | SEV99415.1 | SAMN05421595_0758 | SAMN05421595_0756 | Hypothetical protein. | Hypothetical protein; Belongs to the LOG family. | 0.685 |
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