STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV99664.1beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. (369 aa)    
Predicted Functional Partners:
SEW00276.1
L-erythro-3-methylmalyl-CoA dehydratase.
 
 
 0.927
SEW11898.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.859
SEW08628.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.857
SEV97339.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.843
SEV99686.1
Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
    
0.835
citD
Citrate lyase subunit gamma (acyl carrier protein); Covalent carrier of the coenzyme of citrate lyase.
 
 
 0.834
meaA
(R)-ethylmalonyl-CoA mutase.
  
 0.831
citF
Citrate lyase subunit alpha / citrate CoA-transferase.
 
  
 0.813
ccr
crotonyl-CoA carboxylase/reductase.
 
 
  0.782
citC
[citrate (pro-3S)-lyase] ligase.
 
  
 0.777
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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