STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW02353.1TadE-like protein. (143 aa)    
Predicted Functional Partners:
SEW02323.1
TadE-like protein.
 
     0.963
SEW02303.1
Hypothetical protein.
 
     0.962
SEW02373.1
Hypothetical protein.
 
     0.949
SEW02263.1
Tight adherence protein B.
 
     0.939
SEW02287.1
Tight adherence protein C.
 
     0.939
SEW02244.1
Pilus assembly protein CpaF.
 
     0.872
SEW02005.1
Hypothetical protein.
  
     0.775
SEW02023.1
Flp pilus assembly protein, ATPase CpaE.
  
     0.775
SEW01969.1
Hypothetical protein.
  
     0.773
SEW01988.1
DNA binding domain-containing protein, excisionase family.
  
     0.773
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.