STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW02562.1methylmalonyl-CoA carboxyltransferase 12S subunit. (518 aa)    
Predicted Functional Partners:
accA
Biotin carboxyl carrier protein /biotin carboxylase.
 
 0.996
SEW02515.1
methylmalonyl-CoA carboxyltransferase 1.3S subunit.
 
 0.974
SEW29269.1
methylmalonyl-CoA epimerase.
 
 
 0.924
SEW39253.1
Biotin-requiring enzyme.
 
 0.916
SEW02582.1
methylmalonyl-CoA carboxyltransferase 5S subunit.
    
 0.895
SEW02538.1
methylmalonyl-CoA carboxyltransferase 12S subunit.
    
  0.891
SEW08628.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.848
SEW11898.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.846
SEW07398.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 
 0.822
SEW30373.1
Putative biotin--[acetyl-CoA-carboxylase] ligase; BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.
  
 
 0.801
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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