Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEV86766.1 | SEW06683.1 | SAMN05421595_0145 | SAMN05421595_1091 | Transcriptional antiterminator, BglG family. | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | 0.440 |
SEV86766.1 | SEW32561.1 | SAMN05421595_0145 | SAMN05421595_2075 | Transcriptional antiterminator, BglG family. | PTS system, ascorbate-specific IIB component. | 0.536 |
SEV86766.1 | SEW32571.1 | SAMN05421595_0145 | SAMN05421595_2076 | Transcriptional antiterminator, BglG family. | PTS system IIC component, L-Asc family. | 0.627 |
SEW06683.1 | SEV86766.1 | SAMN05421595_1091 | SAMN05421595_0145 | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | Transcriptional antiterminator, BglG family. | 0.440 |
SEW06683.1 | SEW06704.1 | SAMN05421595_1091 | SAMN05421595_1092 | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | IMP dehydrogenase. | 0.583 |
SEW06683.1 | SEW29995.1 | SAMN05421595_1091 | SAMN05421595_1872 | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | 3-hexulose-6-phosphate synthase. | 0.542 |
SEW06683.1 | SEW31506.1 | SAMN05421595_1091 | SAMN05421595_1981 | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | Xylulokinase. | 0.431 |
SEW06683.1 | SEW31771.1 | SAMN05421595_1091 | SAMN05421595_2002 | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | Integral membrane protein. | 0.459 |
SEW06683.1 | SEW32561.1 | SAMN05421595_1091 | SAMN05421595_2075 | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | PTS system, ascorbate-specific IIB component. | 0.500 |
SEW06683.1 | SEW32571.1 | SAMN05421595_1091 | SAMN05421595_2076 | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | PTS system IIC component, L-Asc family. | 0.555 |
SEW06683.1 | SEW32622.1 | SAMN05421595_1091 | SAMN05421595_2083 | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | Lsr2 protein. | 0.472 |
SEW06683.1 | SEW38376.1 | SAMN05421595_1091 | SAMN05421595_2641 | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | 4-amino-4-deoxychorismate lyase. | 0.459 |
SEW06683.1 | dnaB | SAMN05421595_1091 | SAMN05421595_2879 | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.471 |
SEW06704.1 | SEW06683.1 | SAMN05421595_1092 | SAMN05421595_1091 | IMP dehydrogenase. | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | 0.583 |
SEW29995.1 | SEW06683.1 | SAMN05421595_1872 | SAMN05421595_1091 | 3-hexulose-6-phosphate synthase. | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | 0.542 |
SEW29995.1 | SEW31506.1 | SAMN05421595_1872 | SAMN05421595_1981 | 3-hexulose-6-phosphate synthase. | Xylulokinase. | 0.474 |
SEW29995.1 | SEW32561.1 | SAMN05421595_1872 | SAMN05421595_2075 | 3-hexulose-6-phosphate synthase. | PTS system, ascorbate-specific IIB component. | 0.641 |
SEW29995.1 | SEW32571.1 | SAMN05421595_1872 | SAMN05421595_2076 | 3-hexulose-6-phosphate synthase. | PTS system IIC component, L-Asc family. | 0.670 |
SEW31506.1 | SEW06683.1 | SAMN05421595_1981 | SAMN05421595_1091 | Xylulokinase. | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | 0.431 |
SEW31506.1 | SEW29995.1 | SAMN05421595_1981 | SAMN05421595_1872 | Xylulokinase. | 3-hexulose-6-phosphate synthase. | 0.474 |
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