Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEW09386.1 | pepN-2 | SAMN05421595_1221 | SAMN05421595_1222 | Hypothetical protein. | Aminopeptidase N. | 0.534 |
| SEW09386.1 | whiB-3 | SAMN05421595_1221 | SAMN05421595_0884 | Hypothetical protein. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.432 |
| SEW09427.1 | pepN-2 | SAMN05421595_1223 | SAMN05421595_1222 | MFS transporter, UMF1 family. | Aminopeptidase N. | 0.545 |
| SEW26708.1 | SEW37146.1 | SAMN05421595_1682 | SAMN05421595_2504 | Succinyldiaminopimelate aminotransferase apoenzyme. | Cystathionine gamma-synthase. | 0.798 |
| SEW26708.1 | pepA | SAMN05421595_1682 | SAMN05421595_1070 | Succinyldiaminopimelate aminotransferase apoenzyme. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.768 |
| SEW26708.1 | pepN-2 | SAMN05421595_1682 | SAMN05421595_1222 | Succinyldiaminopimelate aminotransferase apoenzyme. | Aminopeptidase N. | 0.637 |
| SEW26708.1 | pepN-3 | SAMN05421595_1682 | SAMN05421595_2443 | Succinyldiaminopimelate aminotransferase apoenzyme. | Aminopeptidase G. Metallo peptidase. MEROPS family M01. | 0.637 |
| SEW26856.1 | pepN-2 | SAMN05421595_1689 | SAMN05421595_1222 | Protein of unknown function. | Aminopeptidase N. | 0.563 |
| SEW26856.1 | pepN-3 | SAMN05421595_1689 | SAMN05421595_2443 | Protein of unknown function. | Aminopeptidase G. Metallo peptidase. MEROPS family M01. | 0.498 |
| SEW26856.1 | whiB-3 | SAMN05421595_1689 | SAMN05421595_0884 | Protein of unknown function. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.768 |
| SEW37146.1 | SEW26708.1 | SAMN05421595_2504 | SAMN05421595_1682 | Cystathionine gamma-synthase. | Succinyldiaminopimelate aminotransferase apoenzyme. | 0.798 |
| SEW37146.1 | glyA | SAMN05421595_2504 | SAMN05421595_0287 | Cystathionine gamma-synthase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.496 |
| SEW37146.1 | pepA | SAMN05421595_2504 | SAMN05421595_1070 | Cystathionine gamma-synthase. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.775 |
| SEW37146.1 | pepN-2 | SAMN05421595_2504 | SAMN05421595_1222 | Cystathionine gamma-synthase. | Aminopeptidase N. | 0.645 |
| SEW37146.1 | pepN-3 | SAMN05421595_2504 | SAMN05421595_2443 | Cystathionine gamma-synthase. | Aminopeptidase G. Metallo peptidase. MEROPS family M01. | 0.645 |
| glyA | SEW37146.1 | SAMN05421595_0287 | SAMN05421595_2504 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Cystathionine gamma-synthase. | 0.496 |
| glyA | pepA | SAMN05421595_0287 | SAMN05421595_1070 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.807 |
| glyA | pepN-2 | SAMN05421595_0287 | SAMN05421595_1222 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Aminopeptidase N. | 0.682 |
| glyA | pepN-3 | SAMN05421595_0287 | SAMN05421595_2443 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Aminopeptidase G. Metallo peptidase. MEROPS family M01. | 0.682 |
| pepA | SEW26708.1 | SAMN05421595_1070 | SAMN05421595_1682 | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | Succinyldiaminopimelate aminotransferase apoenzyme. | 0.768 |
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