STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW10056.1SPFH domain, Band 7 family protein. (357 aa)    
Predicted Functional Partners:
SEW10071.1
Membrane protein implicated in regulation of membrane protease activity.
 
  
 0.964
arc
Proteasome-associated ATPase.
   
 0.940
ftsH
Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.940
SEW42158.1
Membrane associated serine protease, rhomboid family.
   
 0.805
SEW02775.1
Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
   
    0.694
SEW10043.1
tRNA G18 (ribose-2'-O)-methylase SpoU.
   
   0.656
SEW01080.1
Predicted Zn-dependent peptidase.
  
 0.650
SEW01103.1
Predicted Zn-dependent peptidase.
  
 0.650
SEV97453.1
Protein of unknown function.
   
    0.647
SEW26236.1
Hypothetical protein.
  
    0.642
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.