Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEW10583.1 | SEW10603.1 | SAMN05421595_1280 | SAMN05421595_1281 | Predicted amino acid racemase. | Conserved hypothetical protein. | 0.951 |
SEW10583.1 | SEW10628.1 | SAMN05421595_1280 | SAMN05421595_1282 | Predicted amino acid racemase. | D-ornithine 4,5-aminomutase E subunit. | 0.987 |
SEW10583.1 | SEW10649.1 | SAMN05421595_1280 | SAMN05421595_1283 | Predicted amino acid racemase. | D-ornithine 4,5-aminomutase S subunit. | 0.987 |
SEW10583.1 | SEW10672.1 | SAMN05421595_1280 | SAMN05421595_1284 | Predicted amino acid racemase. | 4-hydroxy-tetrahydrodipicolinate reductase. | 0.918 |
SEW10583.1 | SEW34903.1 | SAMN05421595_1280 | SAMN05421595_2362 | Predicted amino acid racemase. | Hypothetical protein. | 0.805 |
SEW10583.1 | SEW34912.1 | SAMN05421595_1280 | SAMN05421595_2363 | Predicted amino acid racemase. | Cysteine synthase. | 0.778 |
SEW10583.1 | alr-2 | SAMN05421595_1280 | SAMN05421595_1279 | Predicted amino acid racemase. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.726 |
SEW10603.1 | SEW10583.1 | SAMN05421595_1281 | SAMN05421595_1280 | Conserved hypothetical protein. | Predicted amino acid racemase. | 0.951 |
SEW10603.1 | SEW10628.1 | SAMN05421595_1281 | SAMN05421595_1282 | Conserved hypothetical protein. | D-ornithine 4,5-aminomutase E subunit. | 0.953 |
SEW10603.1 | SEW10649.1 | SAMN05421595_1281 | SAMN05421595_1283 | Conserved hypothetical protein. | D-ornithine 4,5-aminomutase S subunit. | 0.953 |
SEW10603.1 | SEW10672.1 | SAMN05421595_1281 | SAMN05421595_1284 | Conserved hypothetical protein. | 4-hydroxy-tetrahydrodipicolinate reductase. | 0.919 |
SEW10603.1 | SEW34903.1 | SAMN05421595_1281 | SAMN05421595_2362 | Conserved hypothetical protein. | Hypothetical protein. | 0.813 |
SEW10603.1 | SEW34912.1 | SAMN05421595_1281 | SAMN05421595_2363 | Conserved hypothetical protein. | Cysteine synthase. | 0.782 |
SEW10603.1 | alr-2 | SAMN05421595_1281 | SAMN05421595_1279 | Conserved hypothetical protein. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.746 |
SEW10628.1 | SEW10583.1 | SAMN05421595_1282 | SAMN05421595_1280 | D-ornithine 4,5-aminomutase E subunit. | Predicted amino acid racemase. | 0.987 |
SEW10628.1 | SEW10603.1 | SAMN05421595_1282 | SAMN05421595_1281 | D-ornithine 4,5-aminomutase E subunit. | Conserved hypothetical protein. | 0.953 |
SEW10628.1 | SEW10649.1 | SAMN05421595_1282 | SAMN05421595_1283 | D-ornithine 4,5-aminomutase E subunit. | D-ornithine 4,5-aminomutase S subunit. | 0.997 |
SEW10628.1 | SEW10672.1 | SAMN05421595_1282 | SAMN05421595_1284 | D-ornithine 4,5-aminomutase E subunit. | 4-hydroxy-tetrahydrodipicolinate reductase. | 0.979 |
SEW10628.1 | SEW34903.1 | SAMN05421595_1282 | SAMN05421595_2362 | D-ornithine 4,5-aminomutase E subunit. | Hypothetical protein. | 0.813 |
SEW10628.1 | SEW34912.1 | SAMN05421595_1282 | SAMN05421595_2363 | D-ornithine 4,5-aminomutase E subunit. | Cysteine synthase. | 0.829 |
page 1 of 4