STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW11898.1Pyruvate-ferredoxin/flavodoxin oxidoreductase. (1215 aa)    
Predicted Functional Partners:
SEV95491.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
  
0.999
SEV95513.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 0.999
SEW08600.1
NADPH-dependent glutamate synthase beta chain.
 0.999
SEW08628.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
 
0.999
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 0.997
SEV95591.1
4Fe-4S binding domain-containing protein.
  
 0.997
sdhA
Succinate dehydrogenase subunit A.
  
 
 0.993
arsD
Arsenical resistance operon trans-acting repressor ArsD.
  
 
 0.991
SEV99234.1
NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 
 0.991
icd
Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
  
 
 0.988
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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