STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW14483.1Ribosome association toxin PasT (RatA) of the RatAB toxin-antitoxin module. (147 aa)    
Predicted Functional Partners:
SEW00630.1
Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family; Non-canonical start codon; manually curated.
  
 
 
 0.828
SEW14459.1
Arsenite efflux ATP-binding protein ArsA.
       0.806
SEW14502.1
Hypothetical protein.
 
     0.803
SEW14436.1
Hypothetical protein.
       0.773
SEV90086.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.769
SEW32188.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.761
SEW33594.1
Arsenite efflux ATP-binding protein ArsA.
 
     0.756
SEW33607.1
Arsenite efflux ATP-binding protein ArsA.
 
     0.732
SEV90241.1
Putative sensory transduction regulator.
  
     0.731
SEW32197.1
UDP-glucose 4-epimerase.
  
     0.717
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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