STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW26403.1Spermidine/putrescine transport system substrate-binding protein. (430 aa)    
Predicted Functional Partners:
SEW26341.1
Spermidine/putrescine transport system permease protein.
 
 0.999
SEW26364.1
Spermidine/putrescine transport system permease protein.
 
 0.998
SEW26386.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.994
potA
iron(III) transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.950
SEW03088.1
iron(III) transport system permease protein.
  
 
 0.931
modC
Molybdate transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.918
SEW26419.1
Hypothetical protein.
       0.631
SEW26438.1
Transcriptional regulator, PadR family.
       0.631
SEV90549.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.584
SEW42327.1
iron(III) transport system ATP-binding protein.
 
     0.570
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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