Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEW04800.1 | SEW28401.1 | SAMN05421595_1005 | SAMN05421595_1765 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. | BFD-like [2Fe-2S] binding domain-containing protein; Manually curated. | 0.440 |
| SEW04800.1 | cobG | SAMN05421595_1005 | SAMN05421595_0400 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. | precorrin-3B synthase. | 0.401 |
| SEW04800.1 | gltB | SAMN05421595_1005 | SAMN05421595_1054 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. | Glutamate synthase (NADH) large subunit. | 0.824 |
| SEW04800.1 | narG | SAMN05421595_1005 | SAMN05421595_2370 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. | Respiratory nitrate reductase alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.868 |
| SEW04800.1 | paaK | SAMN05421595_1005 | SAMN05421595_2562 | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.714 |
| SEW05247.1 | SEW28401.1 | SAMN05421595_1026 | SAMN05421595_1765 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | BFD-like [2Fe-2S] binding domain-containing protein; Manually curated. | 0.440 |
| SEW05247.1 | cobG | SAMN05421595_1026 | SAMN05421595_0400 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | precorrin-3B synthase. | 0.401 |
| SEW05247.1 | gltB | SAMN05421595_1026 | SAMN05421595_1054 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Glutamate synthase (NADH) large subunit. | 0.824 |
| SEW05247.1 | narG | SAMN05421595_1026 | SAMN05421595_2370 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Respiratory nitrate reductase alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.652 |
| SEW05247.1 | paaK | SAMN05421595_1026 | SAMN05421595_2562 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.714 |
| SEW13595.1 | SEW28401.1 | SAMN05421595_1428 | SAMN05421595_1765 | Protein of unknown function. | BFD-like [2Fe-2S] binding domain-containing protein; Manually curated. | 0.480 |
| SEW13595.1 | cobG | SAMN05421595_1428 | SAMN05421595_0400 | Protein of unknown function. | precorrin-3B synthase. | 0.409 |
| SEW28385.1 | SEW28401.1 | SAMN05421595_1764 | SAMN05421595_1765 | Peptidase family S41. | BFD-like [2Fe-2S] binding domain-containing protein; Manually curated. | 0.498 |
| SEW28385.1 | bfr | SAMN05421595_1764 | SAMN05421595_1766 | Peptidase family S41. | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.498 |
| SEW28401.1 | SEW04800.1 | SAMN05421595_1765 | SAMN05421595_1005 | BFD-like [2Fe-2S] binding domain-containing protein; Manually curated. | 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. | 0.440 |
| SEW28401.1 | SEW05247.1 | SAMN05421595_1765 | SAMN05421595_1026 | BFD-like [2Fe-2S] binding domain-containing protein; Manually curated. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.440 |
| SEW28401.1 | SEW13595.1 | SAMN05421595_1765 | SAMN05421595_1428 | BFD-like [2Fe-2S] binding domain-containing protein; Manually curated. | Protein of unknown function. | 0.480 |
| SEW28401.1 | SEW28385.1 | SAMN05421595_1765 | SAMN05421595_1764 | BFD-like [2Fe-2S] binding domain-containing protein; Manually curated. | Peptidase family S41. | 0.498 |
| SEW28401.1 | SEW37440.1 | SAMN05421595_1765 | SAMN05421595_2538 | BFD-like [2Fe-2S] binding domain-containing protein; Manually curated. | Putative ABC transporter-associated repeat protein. | 0.477 |
| SEW28401.1 | bfr | SAMN05421595_1765 | SAMN05421595_1766 | BFD-like [2Fe-2S] binding domain-containing protein; Manually curated. | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.977 |
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