STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW28457.1Metallo-peptidase family M12B Reprolysin-like. (587 aa)    
Predicted Functional Partners:
SEV88807.1
Flagellar assembly protein FliH.
 
     0.696
SEW38051.1
Alpha/beta hydrolase family protein.
  
     0.689
SEV91380.1
Hypothetical protein.
  
     0.679
SEV88061.1
FlgN protein.
  
     0.646
SEV92219.1
Lysophospholipase L1.
  
 
  0.632
SEV97664.1
Polysaccharide biosynthesis protein.
  
     0.586
SEV95469.1
Transcriptional regulator, TetR family.
  
     0.535
SEW34572.1
GDSL-like Lipase/Acylhydrolase family protein.
  
 
  0.534
SEV86391.1
ABC-2 type transport system permease protein.
  
     0.531
SEW28541.1
Protein of unknown function.
   
   0.505
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.