STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW29809.1Hypothetical protein. (223 aa)    
Predicted Functional Partners:
SEW29800.1
Translation factor SUA5; Belongs to the SUA5 family.
       0.773
cobB-2
NAD-dependent deacetylase.
   
    0.689
SEW14255.1
Hypothetical protein.
   
    0.677
SEW02775.1
Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
   
    0.672
metN
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
   
   0.656
SEV87796.1
Manganese/zinc/iron transport system ATP-binding protein.
  
 
 0.651
SEV90030.1
Transcriptional attenuator, LytR family.
   
    0.641
SEV97453.1
Protein of unknown function.
   
    0.636
SEW10056.1
SPFH domain, Band 7 family protein.
   
    0.636
SEW32439.1
Zinc transport system ATP-binding protein.
  
 
 0.568
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.