STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW29995.13-hexulose-6-phosphate synthase. (219 aa)    
Predicted Functional Partners:
SEW29981.1
L-ribulose-5-phosphate 4-epimerase.
 
 0.993
SEW30009.1
Phosphotriesterase-related protein.
 
     0.957
SEW29967.1
2-dehydro-3-deoxygluconokinase.
 
    0.893
SEW29953.1
MFS transporter, putative metabolite:H+ symporter.
 
     0.800
gnd
6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
  0.776
SEW32571.1
PTS system IIC component, L-Asc family.
 
   
 0.670
SEW32561.1
PTS system, ascorbate-specific IIB component.
 
  
 0.641
SEW32550.1
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
  
 0.633
SEW30024.1
DNA-binding transcriptional regulator LsrR, DeoR family.
 
     0.629
SEW06683.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
    
 0.542
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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