Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEW01805.1 | SEW01827.1 | SAMN05421595_0866 | SAMN05421595_0867 | Sporulation and spore germination. | Predicted amidophosphoribosyltransferases. | 0.670 |
SEW01805.1 | SEW30682.1 | SAMN05421595_0866 | SAMN05421595_1919 | Sporulation and spore germination. | Hypothetical protein. | 0.435 |
SEW01805.1 | SEW30694.1 | SAMN05421595_0866 | SAMN05421595_1920 | Sporulation and spore germination. | Protein of unknown function. | 0.494 |
SEW01805.1 | SEW30708.1 | SAMN05421595_0866 | SAMN05421595_1921 | Sporulation and spore germination. | Hypothetical protein. | 0.524 |
SEW01805.1 | SEW30739.1 | SAMN05421595_0866 | SAMN05421595_1923 | Sporulation and spore germination. | Uncharacterized conserved protein, DUF58 family, contains vWF domain. | 0.455 |
SEW01827.1 | SEW01805.1 | SAMN05421595_0867 | SAMN05421595_0866 | Predicted amidophosphoribosyltransferases. | Sporulation and spore germination. | 0.670 |
SEW01827.1 | SEW30708.1 | SAMN05421595_0867 | SAMN05421595_1921 | Predicted amidophosphoribosyltransferases. | Hypothetical protein. | 0.405 |
SEW01827.1 | SEW30739.1 | SAMN05421595_0867 | SAMN05421595_1923 | Predicted amidophosphoribosyltransferases. | Uncharacterized conserved protein, DUF58 family, contains vWF domain. | 0.439 |
SEW30682.1 | SEW01805.1 | SAMN05421595_1919 | SAMN05421595_0866 | Hypothetical protein. | Sporulation and spore germination. | 0.435 |
SEW30682.1 | SEW30694.1 | SAMN05421595_1919 | SAMN05421595_1920 | Hypothetical protein. | Protein of unknown function. | 0.963 |
SEW30682.1 | SEW30708.1 | SAMN05421595_1919 | SAMN05421595_1921 | Hypothetical protein. | Hypothetical protein. | 0.963 |
SEW30682.1 | SEW30723.1 | SAMN05421595_1919 | SAMN05421595_1922 | Hypothetical protein. | MoxR-like ATPase. | 0.830 |
SEW30682.1 | SEW30739.1 | SAMN05421595_1919 | SAMN05421595_1923 | Hypothetical protein. | Uncharacterized conserved protein, DUF58 family, contains vWF domain. | 0.932 |
SEW30682.1 | SEW30754.1 | SAMN05421595_1919 | SAMN05421595_1924 | Hypothetical protein. | Uncharacterized membrane protein SpoIIM, required for sporulation. | 0.775 |
SEW30682.1 | SEW30767.1 | SAMN05421595_1919 | SAMN05421595_1925 | Hypothetical protein. | Uncharacterized membrane protein YckC, RDD family. | 0.779 |
SEW30694.1 | SEW01805.1 | SAMN05421595_1920 | SAMN05421595_0866 | Protein of unknown function. | Sporulation and spore germination. | 0.494 |
SEW30694.1 | SEW30682.1 | SAMN05421595_1920 | SAMN05421595_1919 | Protein of unknown function. | Hypothetical protein. | 0.963 |
SEW30694.1 | SEW30708.1 | SAMN05421595_1920 | SAMN05421595_1921 | Protein of unknown function. | Hypothetical protein. | 0.963 |
SEW30694.1 | SEW30723.1 | SAMN05421595_1920 | SAMN05421595_1922 | Protein of unknown function. | MoxR-like ATPase. | 0.837 |
SEW30694.1 | SEW30739.1 | SAMN05421595_1920 | SAMN05421595_1923 | Protein of unknown function. | Uncharacterized conserved protein, DUF58 family, contains vWF domain. | 0.942 |
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