STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW30739.1Uncharacterized conserved protein, DUF58 family, contains vWF domain. (441 aa)    
Predicted Functional Partners:
SEW30694.1
Protein of unknown function.
 
  
 0.942
SEW30708.1
Hypothetical protein.
 
  
 0.942
SEW30682.1
Hypothetical protein.
 
     0.932
SEW30723.1
MoxR-like ATPase.
  
 0.896
SEW30754.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
  
 0.827
SEW30767.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.789
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
      
 0.672
SEW01805.1
Sporulation and spore germination.
 
     0.455
SEW33607.1
Arsenite efflux ATP-binding protein ArsA.
      
 0.440
SEW01827.1
Predicted amidophosphoribosyltransferases.
 
     0.439
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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