STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW31238.1Capsular polysaccharide biosynthesis protein. (413 aa)    
Predicted Functional Partners:
SEV94207.1
Putative glycosyltransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.816
SEV99596.1
ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.741
SEW31267.1
Glycosyl transferase family 2.
     
 0.656
SEW31251.1
Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family.
       0.625
SEW31282.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
       0.520
SEW31196.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
  
 0.470
SEW31223.1
Glycosyltransferase, GT2 family.
     
 0.443
SEW31167.1
Maltose O-acetyltransferase/hypothetical protein.
  
    0.433
SEW30156.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
     
 0.410
SEW31181.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.407
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.