STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW33389.1Helicase/secretion neighborhood CpaE-like protein. (262 aa)    
Predicted Functional Partners:
SEW33364.1
Type II secretion system (T2SS), protein F.
  
  
 0.939
SEW33370.1
Tight adherence protein B.
  
  
 0.939
SEW33379.1
Pilus assembly protein CpaF.
 
  
 0.903
SEV93450.1
Flp pilus assembly protein CpaB.
  
  
 0.878
SEW33312.1
TadE-like protein.
  
  
 0.767
SEW02287.1
Tight adherence protein C.
  
  
 0.750
SEW02263.1
Tight adherence protein B.
  
  
 0.714
SEW02323.1
TadE-like protein.
  
  
 0.688
SEW06905.1
Protein of unknown function.
  
     0.615
SEW42056.1
Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives).
  
     0.563
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.