STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW33955.1Transcriptional regulator, GntR family. (252 aa)    
Predicted Functional Partners:
SEW33961.1
Gluconokinase.
 
   
 0.695
SEV86784.1
Transcriptional regulator, GntR family.
  
  
 0.675
paaK
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
  0.673
SEW33970.1
gluconate:H+ symporter, GntP family.
 
   
 0.621
SEV89292.1
Transcriptional regulator, GntR family.
  
  
 0.575
SEW35161.1
Transcriptional regulator, GntR family.
  
     0.524
SEW29789.1
Transcriptional regulator, GntR family.
  
     0.522
SEV85383.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.494
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.