Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEV86805.1 | SEW34700.1 | SAMN05421595_0147 | SAMN05421595_2338 | Predicted amidohydrolase. | MFS transporter, YNFM family, putative membrane transport protein. | 0.484 |
SEW34684.1 | SEW34691.1 | SAMN05421595_2336 | SAMN05421595_2337 | Protein of unknown function. | Lysophospholipase, alpha-beta hydrolase superfamily. | 0.550 |
SEW34684.1 | SEW34700.1 | SAMN05421595_2336 | SAMN05421595_2338 | Protein of unknown function. | MFS transporter, YNFM family, putative membrane transport protein. | 0.479 |
SEW34691.1 | SEW34684.1 | SAMN05421595_2337 | SAMN05421595_2336 | Lysophospholipase, alpha-beta hydrolase superfamily. | Protein of unknown function. | 0.550 |
SEW34691.1 | SEW34700.1 | SAMN05421595_2337 | SAMN05421595_2338 | Lysophospholipase, alpha-beta hydrolase superfamily. | MFS transporter, YNFM family, putative membrane transport protein. | 0.696 |
SEW34700.1 | SEV86805.1 | SAMN05421595_2338 | SAMN05421595_0147 | MFS transporter, YNFM family, putative membrane transport protein. | Predicted amidohydrolase. | 0.484 |
SEW34700.1 | SEW34684.1 | SAMN05421595_2338 | SAMN05421595_2336 | MFS transporter, YNFM family, putative membrane transport protein. | Protein of unknown function. | 0.479 |
SEW34700.1 | SEW34691.1 | SAMN05421595_2338 | SAMN05421595_2337 | MFS transporter, YNFM family, putative membrane transport protein. | Lysophospholipase, alpha-beta hydrolase superfamily. | 0.696 |