Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEW00343.1 | SEW35044.1 | SAMN05421595_0797 | SAMN05421595_2376 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.937 |
| SEW00343.1 | SEW40541.1 | SAMN05421595_0797 | SAMN05421595_2812 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Molecular chaperone HtpG. | 0.412 |
| SEW00343.1 | dnaJ | SAMN05421595_0797 | SAMN05421595_0139 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Molecular chaperone DnaJ. | 0.583 |
| SEW00343.1 | dnaJ-2 | SAMN05421595_0797 | SAMN05421595_1406 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.583 |
| SEW00343.1 | hrpA | SAMN05421595_0797 | SAMN05421595_1135 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | ATP-dependent helicase HrpA; Manually curated. | 0.957 |
| SEW00343.1 | rplU | SAMN05421595_0797 | SAMN05421595_1630 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.811 |
| SEW00343.1 | rpsQ | SAMN05421595_0797 | SAMN05421595_0629 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.586 |
| SEW02756.1 | SEW35044.1 | SAMN05421595_0913 | SAMN05421595_2376 | Superfamily II DNA and RNA helicase. | Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.940 |
| SEW02756.1 | SEW40541.1 | SAMN05421595_0913 | SAMN05421595_2812 | Superfamily II DNA and RNA helicase. | Molecular chaperone HtpG. | 0.516 |
| SEW02756.1 | dnaJ | SAMN05421595_0913 | SAMN05421595_0139 | Superfamily II DNA and RNA helicase. | Molecular chaperone DnaJ. | 0.633 |
| SEW02756.1 | dnaJ-2 | SAMN05421595_0913 | SAMN05421595_1406 | Superfamily II DNA and RNA helicase. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.583 |
| SEW02756.1 | hrpA | SAMN05421595_0913 | SAMN05421595_1135 | Superfamily II DNA and RNA helicase. | ATP-dependent helicase HrpA; Manually curated. | 0.957 |
| SEW02756.1 | rplU | SAMN05421595_0913 | SAMN05421595_1630 | Superfamily II DNA and RNA helicase. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.811 |
| SEW02756.1 | rpsQ | SAMN05421595_0913 | SAMN05421595_0629 | Superfamily II DNA and RNA helicase. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.586 |
| SEW04142.1 | SEW35044.1 | SAMN05421595_0975 | SAMN05421595_2376 | Peptidylprolyl isomerase. | Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.943 |
| SEW04142.1 | SEW40541.1 | SAMN05421595_0975 | SAMN05421595_2812 | Peptidylprolyl isomerase. | Molecular chaperone HtpG. | 0.950 |
| SEW31697.1 | SEW35044.1 | SAMN05421595_1996 | SAMN05421595_2376 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.844 |
| SEW31697.1 | dnaJ | SAMN05421595_1996 | SAMN05421595_0139 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Molecular chaperone DnaJ. | 0.898 |
| SEW31697.1 | dnaJ-2 | SAMN05421595_1996 | SAMN05421595_1406 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.898 |
| SEW31697.1 | rplU | SAMN05421595_1996 | SAMN05421595_1630 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.889 |
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