STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW35314.1Calcineurin-like phosphoesterase. (387 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.661
SEW35322.1
DNA polymerase III, epsilon subunit.
  
    0.530
SEV92219.1
Lysophospholipase L1.
   
  0.453
SEW30096.1
Lysophospholipase L1.
   
  0.453
SEW34572.1
GDSL-like Lipase/Acylhydrolase family protein.
   
  0.453
SEW37809.1
Lysophospholipase L1.
   
  0.453
SEW40408.1
RHS repeat-associated core domain-containing protein.
  
 
  0.430
SEW09009.1
Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain.
   
    0.424
SEW28221.1
Hypothetical protein.
  
 
  0.422
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
  
 
   0.419
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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