STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW37094.1Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (494 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase (NADH) large subunit.
     
 0.618
putA
L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  
 0.522
SEW37530.1
Phosphocarrier protein HPr.
     
 0.486
SEW25148.1
SPFH domain / Band 7 family protein.
    
 0.460
SEV89463.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.454
SEW37103.1
ABC-2 type transport system ATP-binding protein.
       0.443
SEW37110.1
Hypothetical protein.
       0.443
SEW37119.1
Predicted transcriptional regulator.
       0.443
SEW37128.1
Hypothetical protein.
       0.443
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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