STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW37413.1Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. (598 aa)    
Predicted Functional Partners:
SEW37404.1
Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family.
 
 0.967
SEW16658.1
Hypothetical protein.
    
 0.948
qcrC
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
  
 
 0.886
SEW37421.1
Choline/glycine/proline betaine transport protein; Belongs to the BCCT transporter (TC 2.A.15) family.
 
  
 0.861
SEW43689.1
Betaine-homocysteine S-methyltransferase.
  
  
 0.765
SEV86993.1
Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase.
 
 
 0.730
gabD
Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.710
SEW31805.1
Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.710
pcd
Delta-1-piperideine-6-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.694
mmsA
Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase.
 
 
 0.694
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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