STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW38116.1Predicted dehydrogenase. (396 aa)    
Predicted Functional Partners:
SEW38127.1
Sugar phosphate isomerase/epimerase.
 
 
  0.962
SEV93961.1
Inosose dehydratase.
 
  0.931
iolD
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
  
 0.901
iolB
5-deoxy-glucuronate isomerase.
 
  
 0.887
iolH
Myo-inositol catabolism protein IolH.
 
 
  0.845
iolC
5-dehydro-2-deoxygluconokinase.
 
    0.779
SEV93910.1
Myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase.
  
     0.744
SEW01371.1
Nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.711
SEW43739.1
L-gulonolactone oxidase.
   
 
  0.663
SEW35180.1
Xylose isomerase-like TIM barrel.
 
 
  0.637
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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