STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW40705.1Fe-S oxidoreductase. (1216 aa)    
Predicted Functional Partners:
SEW08628.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.914
SEW11898.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.914
gltB
Glutamate synthase (NADH) large subunit.
    
 0.841
SEV97339.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.797
SEW29760.1
L-lactate dehydrogenase complex protein LldF.
  
 0.796
pta
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
 
 0.774
SEW29749.1
L-lactate dehydrogenase complex protein LldG.
  
 
 0.765
SEW08600.1
NADPH-dependent glutamate synthase beta chain.
    
 0.753
SEW41616.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 
 0.729
SEV95513.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.720
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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