STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW42202.1Serine/threonine protein kinase. (494 aa)    
Predicted Functional Partners:
SEW42225.1
Protein phosphatase.
 0.990
SEW10949.1
Inner membrane component of T3SS domain-containing protein.
  
 
 
 0.978
SEW42232.1
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr.
 
 
 
 0.972
SEW42237.1
FHA domain-containing protein.
 
 
 
 0.964
rodA
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Belongs to the SEDS family.
 
 
 0.910
pbpA
Cell elongation-specific peptidoglycan D,D-transpeptidase.
     
 0.884
SEW42194.1
Serine/threonine protein kinase.
 
 
0.863
ribA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
  
 
 0.699
pkaF
Serine/threonine protein kinase.
 
 
0.688
SEW34251.1
Serine/threonine protein phosphatase PrpC.
 
 0.677
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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