STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW42264.1Cell wall-active antibiotics response 4TMS YvqF; Manually curated. (161 aa)    
Predicted Functional Partners:
SEW40952.1
CHAD domain-containing protein.
  
     0.589
SEW07724.1
Hypothetical protein.
  
     0.567
SEW34211.1
Hypothetical protein.
 
    0.555
SEW06488.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
    0.505
SEW32391.1
ABC-2 type transport system ATP-binding protein.
 
    0.486
SEV84589.1
Uncharacterized protein YwqG.
  
     0.484
SEV87128.1
Transcriptional regulator, TetR family.
  
     0.484
SEV92853.1
DNA repair exonuclease SbcCD ATPase subunit.
  
     0.455
SEW42257.1
Hypothetical protein.
       0.435
SEV97339.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
       0.434
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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