STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW42472.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (289 aa)    
Predicted Functional Partners:
SEW40048.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.912
gltB
Glutamate synthase (NADH) large subunit.
     
 0.873
SEW08628.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.832
SEW11898.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.823
SEW37530.1
Phosphocarrier protein HPr.
     
 0.806
paaK
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 0.771
SEW07398.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 0.737
SEW37193.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 0.726
SEW37022.1
S-(hydroxymethyl)mycothiol dehydrogenase.
   
 0.715
SEW36840.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.707
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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