STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW42739.1Membrane protease YdiL, CAAX protease family. (279 aa)    
Predicted Functional Partners:
SEW42759.1
Two component transcriptional regulator, LuxR family.
       0.518
SEW42751.1
Signal transduction histidine kinase.
       0.516
SEW33754.1
Ribosomal protein S12 methylthiotransferase accessory factor.
  
  
 0.475
SEW42713.1
Toxin YoeB.
       0.410
SEW42724.1
Antitoxin YefM; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.410
Your Current Organism:
Austwickia chelonae
NCBI taxonomy Id: 100225
Other names: A. chelonae, ATCC 51576, CCUG 47447, DSM 44178, Dermatophilus chelonae, JCM 9706, NBRC 105200, strain W16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.