node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCO1594 | SCO1818 | gene:17759187 | gene:17759415 | SCI35.16c, pheT, proabable phenylalanyl-tRNA synthetase beta chain, len: 840 aa; similar to many e.g. SYFB_ECOLI phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (795 aa), fasta scores; opt: 988 z-score: 1290.9 E(): 0, 36.0% identity in 849 aa overlap. Contains PS00017 ATP/GTP-binding. | tyrosyl-tRNA synthetase (EC 6.1.1.1); Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.964 |
SCO1594 | SCO2076 | gene:17759187 | gene:17759674 | SCI35.16c, pheT, proabable phenylalanyl-tRNA synthetase beta chain, len: 840 aa; similar to many e.g. SYFB_ECOLI phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (795 aa), fasta scores; opt: 988 z-score: 1290.9 E(): 0, 36.0% identity in 849 aa overlap. Contains PS00017 ATP/GTP-binding. | Putative isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. | 0.980 |
SCO1594 | SCO2571 | gene:17759187 | gene:17760173 | SCI35.16c, pheT, proabable phenylalanyl-tRNA synthetase beta chain, len: 840 aa; similar to many e.g. SYFB_ECOLI phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (795 aa), fasta scores; opt: 988 z-score: 1290.9 E(): 0, 36.0% identity in 849 aa overlap. Contains PS00017 ATP/GTP-binding. | SCC123.09c, leuS, leucyl-tRNA synthetase (EC 6.1.1.4) len: 966 aa. Highly similar to many leucyl-tRNA synthetases including: Bacillus subtilis SW:SYL_BACSU(EMBL:M88581) (804 aa), fasta scores opt: 508 z-score: 575.2 E(): 1.2e-24 48.1% identity in 941 aa overlap and Mycobacterium leprae SW:SYL_MYCLE(EMBL:Y14967) (972 aa), fasta scores opt: 3887 z-score: 4430.5 E():0 60.1% identity in 977 aa overlap. Contains a Prosite hit to PS00178 Amino-acyl-transfer RNA synthetases class-I signature and a Pfam match to entry PF00133 tRNA-synt_1, tRNA synthetases class I (I, L, M and V). | 0.984 |
SCO1594 | SCO2615 | gene:17759187 | gene:17760219 | SCI35.16c, pheT, proabable phenylalanyl-tRNA synthetase beta chain, len: 840 aa; similar to many e.g. SYFB_ECOLI phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (795 aa), fasta scores; opt: 988 z-score: 1290.9 E(): 0, 36.0% identity in 849 aa overlap. Contains PS00017 ATP/GTP-binding. | Valyl tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.883 |
SCO1594 | SCO3304 | gene:17759187 | gene:17760923 | SCI35.16c, pheT, proabable phenylalanyl-tRNA synthetase beta chain, len: 840 aa; similar to many e.g. SYFB_ECOLI phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (795 aa), fasta scores; opt: 988 z-score: 1290.9 E(): 0, 36.0% identity in 849 aa overlap. Contains PS00017 ATP/GTP-binding. | SCE68.02, argS, probable arginyl-tRNA synthetase, len: 586 aa; similar to many e.g. SW:SYR_ECOLI (EMBL:X15320), argS, Escherichia coli arginyl-tRNA synthetase (577 aa), fasta scores; opt: 1415 z-score: 1562.9 E(): 0, 43.8% identity in 587 aa overlap. Contains Pfam match to entry PF00750 tRNA-synt_1d, tRNA synthetases class I (R) and PS00178 Aminoacyl-transfer RNA synthetases class-I signature. | 0.901 |
SCO1594 | SCO3795 | gene:17759187 | gene:17761419 | SCI35.16c, pheT, proabable phenylalanyl-tRNA synthetase beta chain, len: 840 aa; similar to many e.g. SYFB_ECOLI phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (795 aa), fasta scores; opt: 988 z-score: 1290.9 E(): 0, 36.0% identity in 849 aa overlap. Contains PS00017 ATP/GTP-binding. | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.907 |
SCO1594 | SCO5360 | gene:17759187 | gene:17763012 | SCI35.16c, pheT, proabable phenylalanyl-tRNA synthetase beta chain, len: 840 aa; similar to many e.g. SYFB_ECOLI phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (795 aa), fasta scores; opt: 988 z-score: 1290.9 E(): 0, 36.0% identity in 849 aa overlap. Contains PS00017 ATP/GTP-binding. | Peptide chain release factor 1 (RF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.607 |
SCO1594 | SCO5625 | gene:17759187 | gene:17763283 | SCI35.16c, pheT, proabable phenylalanyl-tRNA synthetase beta chain, len: 840 aa; similar to many e.g. SYFB_ECOLI phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (795 aa), fasta scores; opt: 988 z-score: 1290.9 E(): 0, 36.0% identity in 849 aa overlap. Contains PS00017 ATP/GTP-binding. | Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (By similarity); Belongs to the EF-Ts family. | 0.845 |
SCO1816 | SCO1817 | gene:17759413 | gene:17759414 | Hypothetical protein; SCI8.01, unknown, partial CDS, len: > 104 aa. Similar to many proteins of undefined function e.g. Mycobacterium tuberculosis TR:P71897 (EMBL; Z79702) hypothetical 54.6 KD protein (505 aa), fasta scores opt: 596 z-score: 748.3 E(): 0 79.6% identity in 103 aa overlap. Overlaps and extends into CDS SCI28.10 on the adjoining cosmid; SCI28.10, partial CDS, unknown, len: >435aa; similar to many of undefined function egs. TR:P71897 (EMBL:Z79702) hypothetical protein from Mycobacterium tuberculosis (505 aa) fasta scores; opt: 1767, z-score: 2036.8, E(): 0, (63.3% identity [...] | SCI8.02, unknown, len: 464 aa. Similar to many proteins of undefined function e.g. Mycobacterium tuberculosis TR: P71898 (EMBL; Z79702) hypothetical 48.7 KD protein MTCY3G12.20 (457 aa), fasta scores opt: 1485 z-score: 1670.5 E():0 53.5% identity in 454 aa overlap. Contains a Pfam match to entry PF01523 PmbA_TldD, Putative modulator of DNA gyrase. | 0.970 |
SCO1816 | SCO1818 | gene:17759413 | gene:17759415 | Hypothetical protein; SCI8.01, unknown, partial CDS, len: > 104 aa. Similar to many proteins of undefined function e.g. Mycobacterium tuberculosis TR:P71897 (EMBL; Z79702) hypothetical 54.6 KD protein (505 aa), fasta scores opt: 596 z-score: 748.3 E(): 0 79.6% identity in 103 aa overlap. Overlaps and extends into CDS SCI28.10 on the adjoining cosmid; SCI28.10, partial CDS, unknown, len: >435aa; similar to many of undefined function egs. TR:P71897 (EMBL:Z79702) hypothetical protein from Mycobacterium tuberculosis (505 aa) fasta scores; opt: 1767, z-score: 2036.8, E(): 0, (63.3% identity [...] | tyrosyl-tRNA synthetase (EC 6.1.1.1); Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.818 |
SCO1817 | SCO1816 | gene:17759414 | gene:17759413 | SCI8.02, unknown, len: 464 aa. Similar to many proteins of undefined function e.g. Mycobacterium tuberculosis TR: P71898 (EMBL; Z79702) hypothetical 48.7 KD protein MTCY3G12.20 (457 aa), fasta scores opt: 1485 z-score: 1670.5 E():0 53.5% identity in 454 aa overlap. Contains a Pfam match to entry PF01523 PmbA_TldD, Putative modulator of DNA gyrase. | Hypothetical protein; SCI8.01, unknown, partial CDS, len: > 104 aa. Similar to many proteins of undefined function e.g. Mycobacterium tuberculosis TR:P71897 (EMBL; Z79702) hypothetical 54.6 KD protein (505 aa), fasta scores opt: 596 z-score: 748.3 E(): 0 79.6% identity in 103 aa overlap. Overlaps and extends into CDS SCI28.10 on the adjoining cosmid; SCI28.10, partial CDS, unknown, len: >435aa; similar to many of undefined function egs. TR:P71897 (EMBL:Z79702) hypothetical protein from Mycobacterium tuberculosis (505 aa) fasta scores; opt: 1767, z-score: 2036.8, E(): 0, (63.3% identity [...] | 0.970 |
SCO1817 | SCO1818 | gene:17759414 | gene:17759415 | SCI8.02, unknown, len: 464 aa. Similar to many proteins of undefined function e.g. Mycobacterium tuberculosis TR: P71898 (EMBL; Z79702) hypothetical 48.7 KD protein MTCY3G12.20 (457 aa), fasta scores opt: 1485 z-score: 1670.5 E():0 53.5% identity in 454 aa overlap. Contains a Pfam match to entry PF01523 PmbA_TldD, Putative modulator of DNA gyrase. | tyrosyl-tRNA synthetase (EC 6.1.1.1); Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.818 |
SCO1818 | SCO1594 | gene:17759415 | gene:17759187 | tyrosyl-tRNA synthetase (EC 6.1.1.1); Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | SCI35.16c, pheT, proabable phenylalanyl-tRNA synthetase beta chain, len: 840 aa; similar to many e.g. SYFB_ECOLI phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (795 aa), fasta scores; opt: 988 z-score: 1290.9 E(): 0, 36.0% identity in 849 aa overlap. Contains PS00017 ATP/GTP-binding. | 0.964 |
SCO1818 | SCO1816 | gene:17759415 | gene:17759413 | tyrosyl-tRNA synthetase (EC 6.1.1.1); Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | Hypothetical protein; SCI8.01, unknown, partial CDS, len: > 104 aa. Similar to many proteins of undefined function e.g. Mycobacterium tuberculosis TR:P71897 (EMBL; Z79702) hypothetical 54.6 KD protein (505 aa), fasta scores opt: 596 z-score: 748.3 E(): 0 79.6% identity in 103 aa overlap. Overlaps and extends into CDS SCI28.10 on the adjoining cosmid; SCI28.10, partial CDS, unknown, len: >435aa; similar to many of undefined function egs. TR:P71897 (EMBL:Z79702) hypothetical protein from Mycobacterium tuberculosis (505 aa) fasta scores; opt: 1767, z-score: 2036.8, E(): 0, (63.3% identity [...] | 0.818 |
SCO1818 | SCO1817 | gene:17759415 | gene:17759414 | tyrosyl-tRNA synthetase (EC 6.1.1.1); Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | SCI8.02, unknown, len: 464 aa. Similar to many proteins of undefined function e.g. Mycobacterium tuberculosis TR: P71898 (EMBL; Z79702) hypothetical 48.7 KD protein MTCY3G12.20 (457 aa), fasta scores opt: 1485 z-score: 1670.5 E():0 53.5% identity in 454 aa overlap. Contains a Pfam match to entry PF01523 PmbA_TldD, Putative modulator of DNA gyrase. | 0.818 |
SCO1818 | SCO2076 | gene:17759415 | gene:17759674 | tyrosyl-tRNA synthetase (EC 6.1.1.1); Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | Putative isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. | 0.866 |
SCO1818 | SCO2571 | gene:17759415 | gene:17760173 | tyrosyl-tRNA synthetase (EC 6.1.1.1); Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | SCC123.09c, leuS, leucyl-tRNA synthetase (EC 6.1.1.4) len: 966 aa. Highly similar to many leucyl-tRNA synthetases including: Bacillus subtilis SW:SYL_BACSU(EMBL:M88581) (804 aa), fasta scores opt: 508 z-score: 575.2 E(): 1.2e-24 48.1% identity in 941 aa overlap and Mycobacterium leprae SW:SYL_MYCLE(EMBL:Y14967) (972 aa), fasta scores opt: 3887 z-score: 4430.5 E():0 60.1% identity in 977 aa overlap. Contains a Prosite hit to PS00178 Amino-acyl-transfer RNA synthetases class-I signature and a Pfam match to entry PF00133 tRNA-synt_1, tRNA synthetases class I (I, L, M and V). | 0.827 |
SCO1818 | SCO2615 | gene:17759415 | gene:17760219 | tyrosyl-tRNA synthetase (EC 6.1.1.1); Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | Valyl tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.837 |
SCO1818 | SCO3304 | gene:17759415 | gene:17760923 | tyrosyl-tRNA synthetase (EC 6.1.1.1); Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | SCE68.02, argS, probable arginyl-tRNA synthetase, len: 586 aa; similar to many e.g. SW:SYR_ECOLI (EMBL:X15320), argS, Escherichia coli arginyl-tRNA synthetase (577 aa), fasta scores; opt: 1415 z-score: 1562.9 E(): 0, 43.8% identity in 587 aa overlap. Contains Pfam match to entry PF00750 tRNA-synt_1d, tRNA synthetases class I (R) and PS00178 Aminoacyl-transfer RNA synthetases class-I signature. | 0.811 |
SCO1818 | SCO3795 | gene:17759415 | gene:17761419 | tyrosyl-tRNA synthetase (EC 6.1.1.1); Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.826 |