node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCO2509 | SCO2510 | gene:17760111 | gene:17760112 | Undecaprenyl phosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Conserved hypothetical protein SCC121.13c; Involved in DNA repair and RecF pathway recombination. | 0.949 |
SCO2509 | SCO2511 | gene:17760111 | gene:17760113 | Undecaprenyl phosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Hypothetical protein SCC121.14c; SCC121.14c, unknown, len: 73 aa. | 0.860 |
SCO2509 | SCO2512 | gene:17760111 | gene:17760114 | Undecaprenyl phosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Hypothetical protein SCC121.15c; SCC121.15c, unknown, len: 68 aa. | 0.860 |
SCO2509 | SCO2539 | gene:17760111 | gene:17760141 | Undecaprenyl phosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Era-like GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.787 |
SCO2509 | SCO3876 | gene:17760111 | gene:17761503 | Undecaprenyl phosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | DNA replication protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (By similarity). | 0.436 |
SCO2510 | SCO2509 | gene:17760112 | gene:17760111 | Conserved hypothetical protein SCC121.13c; Involved in DNA repair and RecF pathway recombination. | Undecaprenyl phosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.949 |
SCO2510 | SCO2511 | gene:17760112 | gene:17760113 | Conserved hypothetical protein SCC121.13c; Involved in DNA repair and RecF pathway recombination. | Hypothetical protein SCC121.14c; SCC121.14c, unknown, len: 73 aa. | 0.867 |
SCO2510 | SCO2512 | gene:17760112 | gene:17760114 | Conserved hypothetical protein SCC121.13c; Involved in DNA repair and RecF pathway recombination. | Hypothetical protein SCC121.15c; SCC121.15c, unknown, len: 68 aa. | 0.867 |
SCO2510 | SCO2539 | gene:17760112 | gene:17760141 | Conserved hypothetical protein SCC121.13c; Involved in DNA repair and RecF pathway recombination. | Era-like GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.946 |
SCO2510 | SCO3355 | gene:17760112 | gene:17760977 | Conserved hypothetical protein SCC121.13c; Involved in DNA repair and RecF pathway recombination. | SCE94.06, mutY, putative adenine glycosylase, len: 308 aa; previously partially sequenced therefore partially identical to TR:E1358524 (EMBL:AJ131213) MutY, putative adenine glycosylase from Streptomyces coelicolor (183 aa) fasta scores; opt: 1220, z-score: 1357.4, E(): 0, (100.0% identity in 183 aa overlap). Also similar to many others e.g. SW:MUTY_SALTY MutY, adenine glycosylase from Salmonella typhimurium (350 aa) fasta scores; opt: 500, z-score: 558.7, E(): 8.3e-24, (39.4% identity in 231 aa overlap). Contains Pfam match to entry PF00730 Endonuclease_3, Endonuclease III. | 0.883 |
SCO2510 | SCO3618 | gene:17760112 | gene:17761241 | Conserved hypothetical protein SCC121.13c; Involved in DNA repair and RecF pathway recombination. | Putative recomination protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.988 |
SCO2510 | SCO3876 | gene:17760112 | gene:17761503 | Conserved hypothetical protein SCC121.13c; Involved in DNA repair and RecF pathway recombination. | DNA replication protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (By similarity). | 0.842 |
SCO2510 | SCO5573 | gene:17760112 | gene:17763231 | Conserved hypothetical protein SCC121.13c; Involved in DNA repair and RecF pathway recombination. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates (By similarity). | 0.875 |
SCO2510 | SCO5769 | gene:17760112 | gene:17763429 | Conserved hypothetical protein SCC121.13c; Involved in DNA repair and RecF pathway recombination. | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.866 |
SCO2510 | SCO5770 | gene:17760112 | gene:17763430 | Conserved hypothetical protein SCC121.13c; Involved in DNA repair and RecF pathway recombination. | RecX, putative regulatory protein; Modulates RecA activity; Belongs to the RecX family. | 0.849 |
SCO2511 | SCO2509 | gene:17760113 | gene:17760111 | Hypothetical protein SCC121.14c; SCC121.14c, unknown, len: 73 aa. | Undecaprenyl phosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.860 |
SCO2511 | SCO2510 | gene:17760113 | gene:17760112 | Hypothetical protein SCC121.14c; SCC121.14c, unknown, len: 73 aa. | Conserved hypothetical protein SCC121.13c; Involved in DNA repair and RecF pathway recombination. | 0.867 |
SCO2511 | SCO2512 | gene:17760113 | gene:17760114 | Hypothetical protein SCC121.14c; SCC121.14c, unknown, len: 73 aa. | Hypothetical protein SCC121.15c; SCC121.15c, unknown, len: 68 aa. | 0.875 |
SCO2512 | SCO2509 | gene:17760114 | gene:17760111 | Hypothetical protein SCC121.15c; SCC121.15c, unknown, len: 68 aa. | Undecaprenyl phosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.860 |
SCO2512 | SCO2510 | gene:17760114 | gene:17760112 | Hypothetical protein SCC121.15c; SCC121.15c, unknown, len: 68 aa. | Conserved hypothetical protein SCC121.13c; Involved in DNA repair and RecF pathway recombination. | 0.867 |