node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCO0618 | SCO0999 | gene:17758201 | gene:17758582 | SCF56.02, hypothetical protein, len: 461 aa; similar to various hypothetical proteins, e.g. TR:BAA86645 (EMBL:AB033763) Staphylococcus aureus hypothetical 49.4 kD protein, 442 aa; fasta scores: opt: 286 z-score: 318.4 E(): 2.3e-10; 26.6% identity in 466 aa overlap. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.769 |
SCO0618 | SCO2533 | gene:17758201 | gene:17760135 | SCF56.02, hypothetical protein, len: 461 aa; similar to various hypothetical proteins, e.g. TR:BAA86645 (EMBL:AB033763) Staphylococcus aureus hypothetical 49.4 kD protein, 442 aa; fasta scores: opt: 286 z-score: 318.4 E(): 2.3e-10; 26.6% identity in 466 aa overlap. | Conserved hypothetical protein SCC117.06; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.921 |
SCO0618 | SCO2597 | gene:17758201 | gene:17760201 | SCF56.02, hypothetical protein, len: 461 aa; similar to various hypothetical proteins, e.g. TR:BAA86645 (EMBL:AB033763) Staphylococcus aureus hypothetical 49.4 kD protein, 442 aa; fasta scores: opt: 286 z-score: 318.4 E(): 2.3e-10; 26.6% identity in 466 aa overlap. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.767 |
SCO0618 | SCO2633 | gene:17758201 | gene:17760239 | SCF56.02, hypothetical protein, len: 461 aa; similar to various hypothetical proteins, e.g. TR:BAA86645 (EMBL:AB033763) Staphylococcus aureus hypothetical 49.4 kD protein, 442 aa; fasta scores: opt: 286 z-score: 318.4 E(): 2.3e-10; 26.6% identity in 466 aa overlap. | Superoxide dismutase [Fe-Zn] (EC 1.15.1.1); Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the iron/manganese superoxide dismutase family. | 0.769 |
SCO0618 | SCO4711 | gene:17758201 | gene:17762360 | SCF56.02, hypothetical protein, len: 461 aa; similar to various hypothetical proteins, e.g. TR:BAA86645 (EMBL:AB033763) Staphylococcus aureus hypothetical 49.4 kD protein, 442 aa; fasta scores: opt: 286 z-score: 318.4 E(): 2.3e-10; 26.6% identity in 466 aa overlap. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.911 |
SCO0618 | SCO4721 | gene:17758201 | gene:17762370 | SCF56.02, hypothetical protein, len: 461 aa; similar to various hypothetical proteins, e.g. TR:BAA86645 (EMBL:AB033763) Staphylococcus aureus hypothetical 49.4 kD protein, 442 aa; fasta scores: opt: 286 z-score: 318.4 E(): 2.3e-10; 26.6% identity in 466 aa overlap. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.671 |
SCO0618 | SCO4730 | gene:17758201 | gene:17762379 | SCF56.02, hypothetical protein, len: 461 aa; similar to various hypothetical proteins, e.g. TR:BAA86645 (EMBL:AB033763) Staphylococcus aureus hypothetical 49.4 kD protein, 442 aa; fasta scores: opt: 286 z-score: 318.4 E(): 2.3e-10; 26.6% identity in 466 aa overlap. | SC6G4.08, rplQ, 50S ribosomal protein L17, len: 168 aa; highly similar to many e.g. RL17_BACST 50S ribosomal protein L17 (119 aa), fasta scores; opt: 339 z-score: 597.2 E (): 5.3e-26, 47.4% identity in 116 aa overlap. Contains approx 50 aa C-terminal extension, not present in other RplQ. | 0.770 |
SCO0999 | SCO0618 | gene:17758582 | gene:17758201 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | SCF56.02, hypothetical protein, len: 461 aa; similar to various hypothetical proteins, e.g. TR:BAA86645 (EMBL:AB033763) Staphylococcus aureus hypothetical 49.4 kD protein, 442 aa; fasta scores: opt: 286 z-score: 318.4 E(): 2.3e-10; 26.6% identity in 466 aa overlap. | 0.769 |
SCO0999 | SCO2533 | gene:17758582 | gene:17760135 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Conserved hypothetical protein SCC117.06; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.904 |
SCO0999 | SCO2597 | gene:17758582 | gene:17760201 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.858 |
SCO0999 | SCO4711 | gene:17758582 | gene:17762360 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.896 |
SCO0999 | SCO4721 | gene:17758582 | gene:17762370 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.904 |
SCO0999 | SCO4730 | gene:17758582 | gene:17762379 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | SC6G4.08, rplQ, 50S ribosomal protein L17, len: 168 aa; highly similar to many e.g. RL17_BACST 50S ribosomal protein L17 (119 aa), fasta scores; opt: 339 z-score: 597.2 E (): 5.3e-26, 47.4% identity in 116 aa overlap. Contains approx 50 aa C-terminal extension, not present in other RplQ. | 0.900 |
SCO2532 | SCO2533 | gene:17760134 | gene:17760135 | SCC117.05, PhoH-like protein, len: 359 aa. Highly similar to many including: Escherichia coli SW:PHOH_ECOLI (EMBL:D10391) phosphate starvation-inducible protein PhoH protein (354 aa), fasta scores opt: 583 z-score: 650.4 E(): 7.8e-29 37.7% identity in 321 aa overlap and Mycobacterium tuberculosis SW:PHOL_MYCTU(EMBL:Z95208) PhoH-like protein (352 aa), fasta scores opt: 1407 z-score: 1560.0 E():0 63.6% identity in 349 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop). | Conserved hypothetical protein SCC117.06; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.983 |
SCO2532 | SCO2534 | gene:17760134 | gene:17760136 | SCC117.05, PhoH-like protein, len: 359 aa. Highly similar to many including: Escherichia coli SW:PHOH_ECOLI (EMBL:D10391) phosphate starvation-inducible protein PhoH protein (354 aa), fasta scores opt: 583 z-score: 650.4 E(): 7.8e-29 37.7% identity in 321 aa overlap and Mycobacterium tuberculosis SW:PHOL_MYCTU(EMBL:Z95208) PhoH-like protein (352 aa), fasta scores opt: 1407 z-score: 1560.0 E():0 63.6% identity in 349 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop). | Putative membrane protein; SCC77.01, unknown, partial CDS, len: > 110 aa. Highly similar to a protein of undefined function from Mycobacterium tuberculosis SW:Y1DE_MYCTU(EMBL:Z95208) (435 aa), fasta scores opt: 290 z-score: 369.6 E(): 3.4e-13 54.0% identity in 100 aa overlap. Overlaps and extends into CDS SCC117.07 on the adjoining cosmid; SCC117.07, possible membrane protein, partial CDS, len: > 358 aa. Highly similar to several proteins of undefined function e.g. Mycobacterium tuberculosis SW:YN66_MYCTU(EMBL:Z95208) hypothetical 47.2 KD protein (435 aa), fasta scores opt: 1159 z-scor [...] | 0.884 |
SCO2532 | SCO2539 | gene:17760134 | gene:17760141 | SCC117.05, PhoH-like protein, len: 359 aa. Highly similar to many including: Escherichia coli SW:PHOH_ECOLI (EMBL:D10391) phosphate starvation-inducible protein PhoH protein (354 aa), fasta scores opt: 583 z-score: 650.4 E(): 7.8e-29 37.7% identity in 321 aa overlap and Mycobacterium tuberculosis SW:PHOL_MYCTU(EMBL:Z95208) PhoH-like protein (352 aa), fasta scores opt: 1407 z-score: 1560.0 E():0 63.6% identity in 349 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop). | Era-like GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.834 |
SCO2533 | SCO0618 | gene:17760135 | gene:17758201 | Conserved hypothetical protein SCC117.06; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | SCF56.02, hypothetical protein, len: 461 aa; similar to various hypothetical proteins, e.g. TR:BAA86645 (EMBL:AB033763) Staphylococcus aureus hypothetical 49.4 kD protein, 442 aa; fasta scores: opt: 286 z-score: 318.4 E(): 2.3e-10; 26.6% identity in 466 aa overlap. | 0.921 |
SCO2533 | SCO0999 | gene:17760135 | gene:17758582 | Conserved hypothetical protein SCC117.06; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.904 |
SCO2533 | SCO2532 | gene:17760135 | gene:17760134 | Conserved hypothetical protein SCC117.06; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | SCC117.05, PhoH-like protein, len: 359 aa. Highly similar to many including: Escherichia coli SW:PHOH_ECOLI (EMBL:D10391) phosphate starvation-inducible protein PhoH protein (354 aa), fasta scores opt: 583 z-score: 650.4 E(): 7.8e-29 37.7% identity in 321 aa overlap and Mycobacterium tuberculosis SW:PHOL_MYCTU(EMBL:Z95208) PhoH-like protein (352 aa), fasta scores opt: 1407 z-score: 1560.0 E():0 63.6% identity in 349 aa overlap. Contains a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop). | 0.983 |
SCO2533 | SCO2534 | gene:17760135 | gene:17760136 | Conserved hypothetical protein SCC117.06; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Putative membrane protein; SCC77.01, unknown, partial CDS, len: > 110 aa. Highly similar to a protein of undefined function from Mycobacterium tuberculosis SW:Y1DE_MYCTU(EMBL:Z95208) (435 aa), fasta scores opt: 290 z-score: 369.6 E(): 3.4e-13 54.0% identity in 100 aa overlap. Overlaps and extends into CDS SCC117.07 on the adjoining cosmid; SCC117.07, possible membrane protein, partial CDS, len: > 358 aa. Highly similar to several proteins of undefined function e.g. Mycobacterium tuberculosis SW:YN66_MYCTU(EMBL:Z95208) hypothetical 47.2 KD protein (435 aa), fasta scores opt: 1159 z-scor [...] | 0.914 |