STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCO1913SCI7.31c, possible small membrane protein, len: 88 aa; contains possible hydrophobic membrane spanning region. (88 aa)    
Predicted Functional Partners:
SCO1916
Putative transferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.
       0.560
SCO1917
Conserved hypothetical protein; SCI7.35c, unknown, len: 197aa; similar to many eg. TR:P95092 (EMBL:Z83866) hypothetical protein from Mycobacterium tuberculosis (202 aa) fasta scores; opt: 398, z-score: 482.3, E(): 1.6e-19, (40.3% identity in 191 aa overlap).
       0.560
SCO1918
SCI7.36c, possible integral membrane protein, len: 106aa; similar to many proposed to be involved in resistance mechanisms eg. SW:EMRE_ECOLI viologen resistance protein from Escherichia coli (110 aa) fasta scores; opt: 313, z-score: 392.7, E(): 1.5e-14, (51.0% identity in 100 aa overlap). Contains Pfam match to entry PF00893 DUF7, Integral membrane protein.
       0.560
SCO1914
Hypothetical protein; SCI7.32, unknown, len: 56aa.
       0.537
SCO1915
Hypothetical protein; SCI7.33, unknown, len: 242aa.
       0.422
Your Current Organism:
Streptomyces coelicolor
NCBI taxonomy Id: 100226
Other names: S. coelicolor A3(2), Streptomyces coelicolor A3(2)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.