STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ61828.1Quinohemoprotein amine dehydrogenase, beta subunit. (372 aa)    
Predicted Functional Partners:
SFQ61729.1
Quinohemoprotein amine dehydrogenase.
 
 0.996
SFQ61748.1
Quinohemoprotein amine dehydrogenase, gamma subunit.
 
 
   0.995
SFQ86331.1
Cytochrome c-550 PedF.
 
 0.961
SFQ58145.1
Cytochrome c peroxidase.
  
 
 0.947
SFQ71900.1
Nitric oxide reductase subunit B; Belongs to the heme-copper respiratory oxidase family.
  
 0.940
SFQ61741.1
Uncharacterized protein.
 
     0.935
SFQ87480.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.913
SFQ62352.1
Cytochrome C oxidase, cbb3-type, subunit III.
  
 0.908
SFQ71543.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.908
SFQ71858.1
Nitrite reductase (NO-forming) / hydroxylamine reductase.
  
 0.908
Your Current Organism:
Pseudomonas formosensis
NCBI taxonomy Id: 1002526
Other names: BCRC 80437, JCM 18415, P. formosensis, Pseudomonas formosensis Lin et al. 2013, Pseudomonas sp. CC-CY503, strain CC-CY503
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.