STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCB80368.1DNA polymerase III subunit delta. (212 aa)    
Predicted Functional Partners:
CCB79912.1
DNA polymerase III beta subunit.
 
 
 0.991
CCB79116.1
Hypothetical protein.
   
 0.990
CCB80836.1
DNA polymerase III alpha subunit.
  
 0.990
CCB79367.1
DNA polymerase III subunit epsilon.
   
 0.982
dnaX
DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
     
  0.900
CCB79114.1
Single-stranded DNA-binding protein.
    
 
 0.897
CCB80367.1
Alternative dihydrofolate reductase 2 / Dihydropteroate synthase.
  
    0.846
CCB80369.1
Hypothetical protein.
       0.845
rppH
Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.
  
 
 0.746
CCB80370.1
Aspartokinase; Belongs to the aspartokinase family.
     
 0.734
Your Current Organism:
Helicobacter bizzozeronii CIII1
NCBI taxonomy Id: 1002804
Other names: H. bizzozeronii CIII-1, Helicobacter bizzozeronii CIII-1, Helicobacter bizzozeronii str. CIII-1, Helicobacter bizzozeronii strain CIII-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.