STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCF79702.1Hypothetical protein. (198 aa)    
Predicted Functional Partners:
CCF79703.1
Hypothetical protein.
     
 0.876
CCF79699.1
Ribosomal large subunit pseudouridine synthase D.
       0.819
CCF79700.1
CTP synthase.
       0.798
CCF79701.1
CTP synthase.
       0.798
CCF79704.1
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
       0.687
CCF79705.1
RecA protein.
       0.687
CCF79698.1
Phosphoserine phosphatase.
       0.552
CCF79706.1
Hypothetical protein.
       0.513
infC
Translation initiation factor 3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
       0.508
CCF79707.1
Threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.496
Your Current Organism:
Helicobacter bizzozeronii CCUG 35545
NCBI taxonomy Id: 1002805
Other names: H. bizzozeronii CCUG 35545, Helicobacter bizzozeronii str. CCUG 35545, Helicobacter bizzozeronii strain CCUG 35545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.