STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSIL_2863TRAP-type uncharacterized transport system, periplasmic component. (113 aa)    
Predicted Functional Partners:
SSIL_2864
TRAP-type uncharacterized transport system, periplasmic component.
     0.967
SSIL_2862
TRAP-type uncharacterized transport system, fused permease component.
 
    0.958
SSIL_0993
TRAP-type uncharacterized transport system, fused permease component.
 
    0.835
SSIL_3606
TRAP-type uncharacterized transport system, fused permease component.
 
    0.835
SSIL_3608
TRAP-type uncharacterized transport system, periplasmic component.
  
     0.774
SSIL_2861
Predicted acyl-CoA transferase/carnitine dehydratase; Belongs to the CoA-transferase III family.
       0.757
SSIL_2865
enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.630
SSIL_2866
acyl-CoA dehydrogenase.
       0.630
SSIL_2867
acyl-CoA dehydrogenase.
       0.630
SSIL_2860
Transcriptional regulator.
       0.481
Your Current Organism:
Solibacillus silvestris
NCBI taxonomy Id: 1002809
Other names: S. silvestris StLB046, Solibacillus silvestris StLB046, Solibacillus silvestris str. StLB046, Solibacillus silvestris strain StLB046
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.