STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I79_000057Calpain-8. (124 aa)    
Predicted Functional Partners:
Capns1
Calpain small subunit 1.
   
 0.817
Cast
Calpastatin.
   
 0.811
Nr1d1
Nuclear receptor subfamily 1 group D member 1.
      
 0.688
Itsn2
Intersectin-2.
   
 
 0.596
I79_009922
Leucine-rich repeat and guanylate kinase domain-containing protein.
   
 
 0.506
Capn1
Calpain-1 catalytic subunit; Belongs to the peptidase C2 family.
   
0.433
Tlr9
Toll-like receptor 9.
    
 
 0.427
Galnt9
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.402
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.