STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chmp1aCharged multivesicular body protein 1a. (196 aa)    
Predicted Functional Partners:
I79_017699
Charged multivesicular body protein 2a.
   
 0.988
Vta1
Vacuolar protein sorting-associated protein VTA1-like.
    
 0.986
Vps4a
Vacuolar protein sorting-associated protein 4A; Belongs to the AAA ATPase family.
   
 0.978
Vps4b
Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.
   
 0.975
Chmp2b
Charged multivesicular body protein 2b.
   
 0.959
I79_015259
Charged multivesicular body protein 1b-2.
  
  
0.928
Mlkl
Mixed lineage kinase domain-like protein.
    
 0.913
Chmp1b
Charged multivesicular body protein 1b.
  
  
 
0.902
I79_017698
Charged multivesicular body protein 2a.
   
 0.753
Chmp4c
Charged multivesicular body protein 4c.
    
 0.743
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.